HMM Summary Page: TIGR01603

Functionphage major tail protein, phi13 family
Trusted Cutoff35.20
Domain Trusted Cutoff35.20
Noise Cutoff34.95
Domain Noise Cutoff34.95
Isology Typesubfamily
HMM Length190
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryProphage functions
Gene Ontology TermGO:0005198: structural molecule activity molecular_function
GO:0019038: provirus cellular_component
GO:0019068: virion assembly biological_process
AuthorHaft DH, Fouts DE, Sunshine J
Entry DateJul 25 2002 12:07PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis HMM describes a set of proteins that share low levels of sequence similarity but similar lengths and similar patterns of charged, hydrophobic, and Gly/Pro residues. All members (except one attributed to mouse embryo cDNA) belong to phage of Gram-positive bacteria. Several are identified as phage major tail proteins. Some members of this family have additional C-terminal regions of about 100 residues not included in this model.
Genome PropertyGenProp0208: phage: major features (HMM)