HMM Summary Page: TIGR01634

AccessionTIGR01634
Nametail_P2_I
Functionphage tail protein I
Trusted Cutoff30.05
Domain Trusted Cutoff30.05
Noise Cutoff24.00
Domain Noise Cutoff24.00
Isology Typeequivalog
HMM Length139
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryProphage functions
Gene Ontology TermGO:0005198: structural molecule activity molecular_function
GO:0005198: structural molecule activity molecular_function
GO:0016032: viral reproduction biological_process
GO:0016032: viral reproduction biological_process
GO:0019012: virion cellular_component
GO:0019012: virion cellular_component
AuthorHaft DH, Fouts DE, Sunshine J
Entry DateAug 16 2002 11:04AM
Last ModifiedFeb 14 2011 3:27PM
CommentThis HMM represents the family of phage P2 protein I and related tail proteins from a number of temperate phage of Gram-negative bacteria. This HMM is built as a fragment model and identifies some phage tail proteins with strong but local similarity to members of the seed alignment.
References DR HAMAP; MF_00612; 1 of 71
Genome PropertyGenProp0208: phage: major features (HMM)
GenProp0208: phage: major features (HMM)