HMM Summary Page: TIGR01707

AccessionTIGR01707
NamegspI
Functiontype II secretion system protein I
Gene SymbolgspI
Trusted Cutoff44.35
Domain Trusted Cutoff44.35
Noise Cutoff34.00
Domain Noise Cutoff34.00
Isology Typeequivalog
HMM Length101
Gene Ontology TermGO:0008565: protein transporter activity molecular_function
GO:0008565: protein transporter activity molecular_function
GO:0008565: protein transporter activity molecular_function
GO:0015627: type II protein secretion system complex cellular_component
GO:0015627: type II protein secretion system complex cellular_component
GO:0015627: type II protein secretion system complex cellular_component
GO:0015628: protein secretion by the type II secretion system biological_process
GO:0015628: protein secretion by the type II secretion system biological_process
GO:0015628: protein secretion by the type II secretion system biological_process
AuthorHaft DH
Entry DateSep 30 2002 4:53PM
Last ModifiedFeb 17 2012 10:32AM
CommentThis HMM represents GspI, one of two proteins highly conserved at their N-termini and described by PF02501 but easily separable phylogenetically. The other is GspJ. Both GspI and GspJ are proteins of the type II secretion pathway, or main terminal branch of the general secretion pathway. This pathway carries proteins across the outer membrane. Note that proteins of type II secretion are cryptic in E. coli K-12 - present but not yet demonstrated to act on any target.
Genome PropertyGenProp0053: type II secretion (HMM)
GenProp0053: type II secretion (HMM)
GenProp0053: type II secretion (HMM)