HMM Summary Page: TIGR01817
| Accession | TIGR01817 |
| Name | nifA |
| Function | Nif-specific regulatory protein |
| Gene Symbol | nifA |
| Trusted Cutoff | 528.85 |
| Domain Trusted Cutoff | 528.85 |
| Noise Cutoff | 421.00 |
| Domain Noise Cutoff | 421.00 |
| Isology Type | equivalog |
| HMM Length | 534 |
| Mainrole Category | Central intermediary metabolism |
| Subrole Category | Nitrogen fixation |
| Author | Haft DH |
| Entry Date | Feb 13 2003 10:29AM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | This HMM represents NifA, a DNA-binding regulatory protein for nitrogen fixation. The model produces scores between the trusted and noise cutoffs for a well-described NifA homolog in Aquifex aeolicus (which lacks nitrogenase), for transcriptional activators of alternative nitrogenases (VFe or FeFe instead of MoFe), and truncated forms. |
| Genome Property | GenProp0029: nitrogen fixation (HMM) |