| Accession | TIGR01868 |
| Name | casD_Cas5e |
| Function | CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI |
| Gene Symbol | cas5e |
| Trusted Cutoff | 68.95 |
| Domain Trusted Cutoff | 68.95 |
| Noise Cutoff | 66.95 |
| Domain Noise Cutoff | 66.95 |
| Isology Type | equivalog |
| HMM Length | 230 |
| Mainrole Category | Mobile and extrachromosomal element functions |
| Subrole Category | Other |
| Gene Ontology Term | GO:0003674: molecular_function molecular_function |
| | GO:0043571: maintenance of CRISPR repeat elements biological_process |
| Author | Haft DH |
| Entry Date | Apr 8 2003 10:49AM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5. |
| References | DR URL http://www.tigr.org/tigr-scripts/CMR2/genome_property_def.spl?prop=2003
DR URL http://www.tigr.org/tigr-scripts/CMR2/genome_property_def.spl?prop=57302
RN [1]
RT A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/cas subtypes exist in prokaryotic genomes
RA Haft DH, Selengut JD, Mongodin EF, Nelsen KE
RL PLOS Comput. Biol. 1(6), e60-e69, 2005 |
| Genome Property | GenProp0315: CRISPR system, Ecoli subtype (HMM) |
| | GenProp0021: CRISPR region (HMM) |
