| Accession | TIGR01870 |
| Name | cas_TM1810_Csm2 |
| Function | CRISPR type III-A/MTUBE-associated protein Csm2 |
| Gene Symbol | csm2 |
| Trusted Cutoff | 30.60 |
| Domain Trusted Cutoff | 30.60 |
| Noise Cutoff | 29.25 |
| Domain Noise Cutoff | 29.25 |
| Isology Type | hypoth_equivalog_domain |
| HMM Length | 96 |
| Mainrole Category | Mobile and extrachromosomal element functions |
| Subrole Category | Other |
| Gene Ontology Term | GO:0003674: molecular_function molecular_function |
| | GO:0043571: maintenance of CRISPR repeat elements biological_process |
| Author | Haft DH |
| Entry Date | Apr 8 2003 5:21PM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | These proteins are found adjacent to a characteristic short, palidromic repeat cluster termed CRISPR, a probable mobile DNA element. This HMM represents the C-terminal domain of a minor family of CRISPR-associated protein from the Mtube subtype of CRISPR/Cas locus. The family is designated Csm2, for CRISPR/Cas Subtype Mtube Protein 2. |
| References | DR URL http://www.tigr.org/tigr-scripts/CMR2/genome_property_def.spl?prop=2003
DR URL http://www.tigr.org/tigr-scripts/CMR2/genome_property_def.spl?prop=57305
RN [1]
RT A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/cas subtypes exist in prokaryotic genomes
RA Haft DH, Selengut JD, Mongodin EF, Nelsen KE
RL PLOS Comput. Biol. 1(6), e60-e69, 2005 |
| Genome Property | GenProp0318: CRISPR system, Mtube subtype (RAMP-like) (HMM) |
| | GenProp0021: CRISPR region (HMM) |
