HMM Summary Page: TIGR01954
| Accession | TIGR01954 |
| Name | nusA_Cterm_rpt |
| Function | transcription termination factor NusA, C-terminal duplication |
| Gene Symbol | nusA |
| Trusted Cutoff | 48.15 |
| Domain Trusted Cutoff | 48.15 |
| Noise Cutoff | 30.25 |
| Domain Noise Cutoff | 30.25 |
| Isology Type | equivalog_domain |
| HMM Length | 50 |
| Mainrole Category | Transcription |
| Subrole Category | Transcription factors |
| Author | Haft DH |
| Entry Date | Jul 28 2003 1:06PM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | NusA is a bacterial transcription termination factor. It is named for its interaction with phage lambda protein N, as part of the N utilization substance. Some members of the NusA family have a long C-terminal extension. This HMM represents an acidic 50-residue region found in two copies toward the C-terminus of most Proteobacterial NusA proteins, spaced about 26 residues apart. Analogous C-terminal extensions in some other bacterial lineages lack apparent homology but appear similarly acidic. |
| Genome Property | GenProp0132: transcription termination - antitermination Nus factors (HMM) |