HMM Summary Page: TIGR02150

Functionisopentenyl-diphosphate delta-isomerase
Gene Symbolidi
Trusted Cutoff105.80
Domain Trusted Cutoff105.80
Noise Cutoff59.45
Domain Noise Cutoff59.45
Isology Typeequivalog
EC Number5.3.3.2
HMM Length159
Mainrole CategoryBiosynthesis of cofactors, prosthetic groups, and carriers
Subrole CategoryOther
Gene Ontology TermGO:0004452: isopentenyl-diphosphate delta-isomerase activity molecular_function
GO:0008299: isoprenoid biosynthetic process biological_process
AuthorHaft DH
Entry DateMar 15 2004 10:30PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis HMM represents type 1 of two non-homologous families of the enzyme isopentenyl-diphosphate delta-isomerase (IPP isomerase). IPP is an essential building block for many compounds, including enzyme cofactors, sterols, and prenyl groups. This inzyme interconverts isopentenyl diphosphate and dimethylallyl diphosphate.
ReferencesDR EXPERIMENTAL; SP|Q46822; Escherichia coli DR EXPERIMENTAL; SP|Q39472; Clarkia breweri DR EXPERIMENTAL; SP|P15496; Saccharomyces cerevisiae DR HAMAP; MF_00202; 61 of 65
Genome PropertyGenProp0758: lycopene biosynthesis from IPP (HMM)