| Accession | TIGR02165 |
| Name | cas_GSU0054 |
| Function | CRISPR-associated protein GSU0054/csb2, Dpsyc system |
| Gene Symbol | csb2 |
| Trusted Cutoff | 45.00 |
| Domain Trusted Cutoff | 45.00 |
| Noise Cutoff | 30.00 |
| Domain Noise Cutoff | 30.00 |
| Isology Type | hypoth_equivalog |
| HMM Length | 492 |
| Mainrole Category | Mobile and extrachromosomal element functions |
| Subrole Category | Other |
| Gene Ontology Term | GO:0003674: molecular_function molecular_function |
| | GO:0043571: maintenance of CRISPR repeat elements biological_process |
| Author | Haft DH |
| Entry Date | Apr 19 2004 11:08AM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | This HMM represents a CRISPR-associated protein from the Dpsyc subtype, named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins. |
| References | DR URL http://www.tigr.org/tigr-scripts/CMR2/genome_property_def.spl?prop=2003
RN [1]
RT A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/cas subtypes exist in prokaryotic genomes
RA Haft DH, Selengut JD, Mongodin EF, Nelsen KE
RL PLOS Comput. Biol. 1(6), e60-e69, 2005 |
| Genome Property | GenProp0469: CRISPR system, Dpsyc subtype (HMM) |
| | GenProp0021: CRISPR region (HMM) |
