HMM Summary Page: TIGR02242

Functionphage tail protein domain
Trusted Cutoff51.85
Domain Trusted Cutoff51.85
Noise Cutoff33.45
Domain Noise Cutoff33.45
Isology Typedomain
HMM Length131
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryProphage functions
AuthorHaft DH
Entry DateJul 20 2004 2:41PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis model describes a region of sequence similarity shared by a number of uncharacterized proteins in bacterial genomes, including Geobacter sulfurreducens PCA, Mesorhizobium loti, Streptomyces coelicolor A3(2), Gloeobacter violaceus PCC 7421, and Myxococcus xanthus. In all cases, the genomic region resembles a phage tail region, based on tentative identifications of neighboring genes. A region of this domain resembles a region of TIGR01634, another phage tail protein model.
Genome PropertyGenProp0208: phage: major features (HMM)