HMM Summary Page: TIGR02297

AccessionTIGR02297
NameHpaA
Function4-hydroxyphenylacetate catabolism regulatory protein HpaA
Gene SymbolhpaA
Trusted Cutoff274.65
Domain Trusted Cutoff274.65
Noise Cutoff197.30
Domain Noise Cutoff197.30
Isology Typeequivalog
HMM Length287
Gene Ontology TermGO:0003700: sequence-specific DNA binding transcription factor activity molecular_function
GO:0003700: sequence-specific DNA binding transcription factor activity molecular_function
GO:0003700: sequence-specific DNA binding transcription factor activity molecular_function
GO:0006355: regulation of transcription, DNA-dependent biological_process
GO:0006355: regulation of transcription, DNA-dependent biological_process
GO:0006355: regulation of transcription, DNA-dependent biological_process
AuthorSelengut J
Entry DateSep 10 2004 11:54AM
Last ModifiedFeb 14 2011 3:27PM
CommentThis putative transcriptional regulator, which contains both the substrate-binding, dimerization domain (PF02311) and the helix-turn-helix DNA-binding domain (PF00165) of the AraC famil, is located proximal to genes of the 4-hydroxyphenylacetate catabolism pathway [1].
ReferencesRN [1] RM PMID: 8550403 RT Molecular characterization of the 4-hydroxyphenylacetate catabolic pathway of Escherichia coli W: engineering a mobile aromatic degradative cluster. RA Prieto MA, Diaz E, Garcia JL. RL J Bacteriol. 1996 Jan;178(1):111-20.
Genome PropertyGenProp0231: 4-hydroxyphenylacetate degradation (HMM)
GenProp0231: 4-hydroxyphenylacetate degradation (HMM)
GenProp0231: 4-hydroxyphenylacetate degradation (HMM)
GenProp0231: 4-hydroxyphenylacetate degradation (HMM)
GenProp0231: 4-hydroxyphenylacetate degradation (HMM)
GenProp0231: 4-hydroxyphenylacetate degradation (HMM)