HMM Summary Page: TIGR02454

AccessionTIGR02454
NameECF_T_CbiQ
Functioncobalt ECF transporter T component CbiQ
Gene SymbolcbiQ
Trusted Cutoff111.80
Domain Trusted Cutoff111.80
Noise Cutoff105.15
Domain Noise Cutoff105.15
Isology Typeequivalog
HMM Length200
Mainrole CategoryTransport and binding proteins
Subrole CategoryCations and iron carrying compounds
Gene Ontology TermGO:0005887: integral to plasma membrane cellular_component
GO:0005887: integral to plasma membrane cellular_component
GO:0006824: cobalt ion transport biological_process
GO:0006824: cobalt ion transport biological_process
GO:0032778: cobalt-transporting ATPase activity molecular_function
GO:0032778: cobalt-transporting ATPase activity molecular_function
GO:0043190: ATP-binding cassette (ABC) transporter complex cellular_component
GO:0043190: ATP-binding cassette (ABC) transporter complex cellular_component
AuthorSelengut J, Haft DH
Entry DateFeb 2 2005 3:14PM
Last ModifiedMar 19 2014 3:34PM
CommentThis model represents the CbiQ component of the cobalt-specific ECF-type. CbiQ is now recognized as the T component of energy-coupling factor (ECF)-type transporters. The S component confers specificity (CbiM-N for cobalt systems), which CbiO is the ABC-family ATPase. In general, proteins found by this model reside next to the other putative subunits of the complex, identified as CbiN, CbiO, or CbiM. Note that the designation of cobalt transporter has been spread excessively among ECF system transporters with many other specificities.
ReferencesRN [1] RM PMID:18931129 RT A novel class of modular transporters for vitamins in prokaryotes. RA Rodionov DA, Hebbeln P, Eudes A, ter Beek J, Rodionova IA, Erkens GB, Slotboom DJ, Gelfand MS, Osterman AL, Hanson AD, Eitinger T RL J Bacteriol. 2009 Jan;191(1):42-51. doi: 10.1128/JB.01208-08.
Genome PropertyGenProp0277: cobalt import system (ABC transporter: 3.A.1.18.1) (HMM)
GenProp0277: cobalt import system (ABC transporter: 3.A.1.18.1) (HMM)