HMM Summary Page: TIGR02474
| Accession | TIGR02474 |
| Name | pec_lyase |
| Function | pectate lyase |
| Gene Symbol | pelA |
| Trusted Cutoff | 189.80 |
| Domain Trusted Cutoff | 189.80 |
| Noise Cutoff | 31.80 |
| Domain Noise Cutoff | 31.80 |
| Isology Type | equivalog |
| EC Number | 4.2.2.2 |
| HMM Length | 295 |
| Mainrole Category | Energy metabolism |
| Subrole Category | Biosynthesis and degradation of polysaccharides |
| Gene Ontology Term | GO:0030570: pectate lyase activity molecular_function |
| GO:0045490: pectin catabolic process biological_process | |
| Author | Haft DH |
| Entry Date | Feb 15 2005 5:08PM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. |
| References | RN [1] RM 10691990 RT Nucleotide and amino-acid sequences of a new-type pectate lyase from an alkaliphilic strain of Bacillus. RA Sawada K, Ogawa A, Ozawa T, Sumitomo N, Hatada Y, Kobayashi T, Ito S. RL Eur J Biochem. 2000 Mar;267(5):1510-5. RN [2] RM 10198006 RT Azospirillum irakense produces a novel type of pectate lyase. RA Bekri MA, Desair J, Keijers V, Proost P, Searle-van Leeuwen M, Vanderleyden J, Vande Broek A. RL J Bacteriol. 1999 Apr;181(8):2440-7. |