HMM Summary Page: TIGR02480

AccessionTIGR02480
NamefliN
Functionflagellar motor switch protein FliN
Gene SymbolfliN
Trusted Cutoff84.05
Domain Trusted Cutoff84.05
Noise Cutoff58.35
Domain Noise Cutoff58.35
Isology Typeequivalog_domain
HMM Length77
Mainrole CategoryCellular processes
Subrole CategoryChemotaxis and motility
Gene Ontology TermGO:0001539: ciliary or flagellar motility biological_process
GO:0001539: ciliary or flagellar motility biological_process
GO:0001539: ciliary or flagellar motility biological_process
GO:0003774: motor activity molecular_function
GO:0003774: motor activity molecular_function
GO:0003774: motor activity molecular_function
GO:0009288: bacterial-type flagellum cellular_component
GO:0009288: bacterial-type flagellum cellular_component
GO:0009288: bacterial-type flagellum cellular_component
AuthorHaft DH
Entry DateFeb 22 2005 5:29PM
Last ModifiedFeb 14 2011 3:27PM
CommentProteins that consist largely of the domain described by this HMM for this protein family can be designated flagellar motor switch protein FliN. Longer proteins in which this region is a C-terminal domain typically are designated FliY. More distantly related sequences, outside the scope of this family, are associated with type III secretion and include the surface presentation of antigens protein SpaO required or invasion of host cells by Salmonella enterica.
Genome PropertyGenProp0883: flagellar motor switch (rotor) complex (HMM)
GenProp0883: flagellar motor switch (rotor) complex (HMM)
GenProp0883: flagellar motor switch (rotor) complex (HMM)
GenProp0883: flagellar motor switch (rotor) complex (HMM)
GenProp0883: flagellar motor switch (rotor) complex (HMM)
GenProp0883: flagellar motor switch (rotor) complex (HMM)
GenProp0883: flagellar motor switch (rotor) complex (HMM)
GenProp0883: flagellar motor switch (rotor) complex (HMM)
GenProp0883: flagellar motor switch (rotor) complex (HMM)