HMM Summary Page: TIGR02500

AccessionTIGR02500
Nametype_III_yscD
Functiontype III secretion apparatus protein, YscD/HrpQ family
Trusted Cutoff86.00
Domain Trusted Cutoff86.00
Noise Cutoff56.85
Domain Noise Cutoff56.85
Isology Typeequivalog
HMM Length413
Mainrole CategoryProtein fate
Subrole CategoryProtein and peptide secretion and trafficking
Gene Ontology TermGO:0030254: protein secretion by the type III secretion system biological_process
GO:0030254: protein secretion by the type III secretion system biological_process
GO:0030254: protein secretion by the type III secretion system biological_process
AuthorHaft DH
Entry DateMar 2 2005 4:16PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis family represents a conserved protein of bacterial type III secretion systems. Gene symbols are variable from species to species. Members are designated YscD in Yersinia, HrpQ in Pseudomonas syringae, and EscD in enteropathogenic Escherichia coli. In the Chlamydiae, this model describes the C-terminal 400 residues of a longer protein.
ReferencesRN [1] RM 12704110 RT Use of the Galleria mellonella caterpillar as a model host to study the role of the type III secretion system in Pseudomonas aeruginosa pathogenesis. RA Miyata S, Casey M, Frank DW, Ausubel FM, Drenkard E. RL Infect Immun. 2003 May;71(5):2404-13.
Genome PropertyGenProp0052: type III secretion (HMM)
GenProp0052: type III secretion (HMM)
GenProp0052: type III secretion (HMM)
GenProp0052: type III secretion (HMM)
GenProp0052: type III secretion (HMM)
GenProp0052: type III secretion (HMM)