HMM Summary Page: TIGR02502

AccessionTIGR02502
Nametype_III_YscX
Functiontype III secretion protein, YscX family
Trusted Cutoff99.20
Domain Trusted Cutoff99.20
Noise Cutoff44.85
Domain Noise Cutoff44.85
Isology Typeequivalog
HMM Length121
Mainrole CategoryProtein fate
Subrole CategoryProtein and peptide secretion and trafficking
AuthorHaft DH
Entry DateMar 3 2005 3:01PM
Last ModifiedFeb 14 2011 3:27PM
CommentMembers of this family are encoded within bacterial type III secretion gene clusters. Among all species with type III secretion, those with this protein are found among those that target animal rather than plant cells. The member of this family in Yersinia was shown by mutation to be required for type III secretion of Yops effector proteins and therefore is believe to be part of the secretion machinery.
ReferencesRN [1] RM 9882687 RT Identification of SycN, YscX, and YscY, three new elements of the Yersinia yop virulon. RA Iriarte M, Cornelis GR. RL J Bacteriol. 1999 Jan;181(2):675-80.
Genome PropertyGenProp0052: type III secretion (HMM)
GenProp0052: type III secretion (HMM)
GenProp0052: type III secretion (HMM)
GenProp0052: type III secretion (HMM)
GenProp0052: type III secretion (HMM)
GenProp0052: type III secretion (HMM)