HMM Summary Page: TIGR02514

AccessionTIGR02514
Nametype_III_yscP
Functiontype III secretion system needle length determinant
Trusted Cutoff76.50
Domain Trusted Cutoff76.50
Noise Cutoff35.70
Domain Noise Cutoff35.70
Isology Typeequivalog_domain
HMM Length129
AuthorHaft DH
Entry DateMar 8 2005 5:49PM
Last ModifiedFeb 14 2011 3:27PM
CommentMembers of this family include YscP of the Yersinia type III secretion system and equivalent proteins in other animal pathogen bacterial type III secretion systems. The model describes the conserved C-terminal region. N-terminal regions are poorly conserved and variable in length with some low-complexity sequence.
ReferencesRN [1] RM 14657497 RT The needle length of bacterial injectisomes is determined by a molecular ruler. RA Journet L, Agrain C, Broz P, Cornelis GR. RL Science. 2003 Dec 5;302(5651):1757-60.
Genome PropertyGenProp0052: type III secretion (HMM)
GenProp0052: type III secretion (HMM)
GenProp0052: type III secretion (HMM)