HMM Summary Page: TIGR02581

AccessionTIGR02581
Namecas_cyan_RAMP
FunctionCRISPR-associated RAMP protein, SSO1426 family
Trusted Cutoff108.05
Domain Trusted Cutoff108.05
Noise Cutoff89.40
Domain Noise Cutoff89.40
Isology Typehypoth_equivalog
HMM Length216
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryOther
Gene Ontology TermGO:0003674: molecular_function molecular_function
GO:0003674: molecular_function molecular_function
GO:0003674: molecular_function molecular_function
GO:0043571: maintenance of CRISPR repeat elements biological_process
GO:0043571: maintenance of CRISPR repeat elements biological_process
GO:0043571: maintenance of CRISPR repeat elements biological_process
AuthorHaft DH
Entry DateMay 11 2005 11:29AM
Last ModifiedFeb 14 2011 3:27PM
CommentMembers of this CRISPR-associated (cas) gene family are found in the RAMP-2 subtype of CRISPR/cas locus and designated TM1809 family.
ReferencesDR URL http://www.tigr.org/tigr-scripts/CMR2/genome_property_def.spl?prop=2003 RN [1] RT A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/cas subtypes exist in prokaryotic genomes RA Haft DH, Selengut JD, Mongodin EF, Nelsen KE RL PLOS Comput. Biol. 1(6), e60-e69, 2005
Genome PropertyGenProp0021: CRISPR region (HMM)
GenProp0021: CRISPR region (HMM)
GenProp0021: CRISPR region (HMM)
GenProp0021: CRISPR region (HMM)
GenProp0021: CRISPR region (HMM)
GenProp0021: CRISPR region (HMM)
GenProp0021: CRISPR region (HMM)
GenProp0021: CRISPR region (HMM)
GenProp0021: CRISPR region (HMM)