HMM Summary Page: TIGR02586

AccessionTIGR02586
Namecas_devS
FunctionCRISPR-associated protein Cas5/DevS, subtype MYXAN
Gene Symbolcas5
Trusted Cutoff111.50
Domain Trusted Cutoff111.50
Noise Cutoff58.30
Domain Noise Cutoff58.30
Isology Typeexception
HMM Length183
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryOther
Gene Ontology TermGO:0003674: molecular_function molecular_function
GO:0043571: maintenance of CRISPR repeat elements biological_process
AuthorHaft DH
Entry DateMay 24 2005 8:43AM
Last ModifiedFeb 14 2011 3:27PM
CommentThis model represents DevS of Myxococcus xanthus and related proteins of Leptospira interrogans and Gemmata obscuriglobus. This protein is encoded in a cluster of CRISPR-associated (cas) genes, and in the special case of Myxococcus xanthus has taken on a role in the control of fruiting body development. CRISPRs are clustered, regularly interspaced short palidromic repeats. This protein family is related to models TIGR01868, TIGR01895, and TIGR01876.
ReferencesRN [1] RM 16292354 RT A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/cas subtypes exist in prokaryotic genomes RA Haft DH, Selengut JD, Mongodin EF, Nelsen KE RL PLOS Comput. Biol. 1(6), e60-e69, 2005
Genome PropertyGenProp0922: CRISPR system, Myxan subtype (HMM)
GenProp0021: CRISPR region (HMM)