HMM Summary Page: TIGR02591

FunctionCRISPR-associated protein Cas8b/Csh1, subtype I-B/HMARI
Gene Symbolcas8b
Trusted Cutoff104.05
Domain Trusted Cutoff104.05
Noise Cutoff33.25
Domain Noise Cutoff33.25
Isology Typehypoth_equivalog_domain
HMM Length395
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryOther
Gene Ontology TermGO:0003674: molecular_function molecular_function
GO:0043571: maintenance of CRISPR repeat elements biological_process
AuthorSelengut J, Haft DH
Entry DateMay 26 2005 9:13AM
Last ModifiedFeb 14 2011 3:27PM
CommentThis domain is found in the C-terminal 2/3 of a family of CRISPR associated proteins of the Hmari subtype [1]. Except for the two sequences from halophilic archaea this domain contains a pair of CXXC motifs.
ReferencesDR URL DR URL RN [1] RT A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/cas subtypes exist in prokaryotic genomes RA Haft DH, Selengut JD, Mongodin EF, Nelsen KE RL PLOS Comput. Biol. 1(6), e60-e69, 2005
Genome PropertyGenProp0320: CRISPR system, I-B subtype, Hmari branch (HMM)
GenProp0021: CRISPR region (HMM)