HMM Summary Page: TIGR02608
Accession | TIGR02608 |
Name | delta_60_rpt |
Function | delta-60 repeat domain |
Trusted Cutoff | 76.50 |
Domain Trusted Cutoff | 14.00 |
Noise Cutoff | 67.00 |
Domain Noise Cutoff | 8.00 |
Isology Type | domain |
HMM Length | 55 |
Author | Haft DH |
Entry Date | Jun 21 2005 1:19PM |
Last Modified | Feb 14 2011 3:27PM |
Comment | This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment. |