HMM Summary Page: TIGR02629

AccessionTIGR02629
NameL_rham_iso_rhiz
FunctionL-rhamnose catabolism isomerase
Gene Symbol646.75
Trusted Cutoff646.75
Domain Trusted Cutoff416.75
Noise Cutoff416.75
Domain Noise CutoffSugars
Isology TypeRN [1] RM 15184124 RT Cloning, nucleotide sequence, and overexpression of the L-rhamnose isomerase gene from Pseudomonas stutzeri in Escherichia coli. RA Leang K, Takada G, Ishimura A, Okita M, Izumori K. RL Appl Environ Microbiol. 2004 Jun;70(6):3298-304. RN [2] RM 15576793 RT A genetic locus necessary for rhamnose uptake and catabolism in Rhizobium leguminosarum bv. trifolii. RA Richardson JS, Hynes MF, Oresnik IJ. RL J Bacteriol. 2004 Dec;186(24):8433-42.
EC Number5.3.1.-
HMM Lengthequivalog
Mainrole Category412
Subrole CategoryEnergy metabolism
Gene Ontology TermGO:0008740: L-rhamnose isomerase activity molecular_function
GO:0008740: L-rhamnose isomerase activity molecular_function
GO:0019301: rhamnose catabolic process biological_process
GO:0019301: rhamnose catabolic process biological_process
AuthorHaft DH
Entry DateJul 26 2005 3:06PM
Last ModifiedFeb 14 2011 3:27PM
CommentMembers of this family are isomerases in the pathway of L-rhamnose catabolism as found in Pseudomonas stutzeri and in a number of the Rhizobiales. This family differs from the L-rhamnose isomerases of Escherichia coli (see TIGR01748). This enzyme catalyzes the isomerization step in rhamnose catabolism. Genetic evidence in Rhizobium leguminosarum bv. trifolii suggests phosphorylation occurs first, then isomerization of the the phosphorylated sugar, but characterization of the recombinant enzyme from Pseudomonas
Referencesstutzeri does show L-rhamnose isomerase activity. The name given is deliberately vague because the relative order of phosphorylation and isomerization is unclear.
Genome PropertyGenProp0457: rhamnose catabolism (HMM)
GenProp0457: rhamnose catabolism (HMM)