HMM Summary Page: TIGR02634

AccessionTIGR02634
NamexylF
FunctionD-xylose ABC transporter, D-xylose-binding protein
Gene SymbolxylF
Trusted Cutoff389.55
Domain Trusted Cutoff389.55
Noise Cutoff232.05
Domain Noise Cutoff232.05
Isology Typeequivalog
HMM Length302
Mainrole CategoryTransport and binding proteins
Subrole CategoryCarbohydrates, organic alcohols, and acids
Gene Ontology TermGO:0015614: D-xylose-importing ATPase activity molecular_function
GO:0015614: D-xylose-importing ATPase activity molecular_function
GO:0015614: D-xylose-importing ATPase activity molecular_function
GO:0015753: D-xylose transport biological_process
GO:0015753: D-xylose transport biological_process
GO:0015753: D-xylose transport biological_process
GO:0030288: outer membrane-bounded periplasmic space cellular_component
GO:0030288: outer membrane-bounded periplasmic space cellular_component
GO:0030288: outer membrane-bounded periplasmic space cellular_component
GO:0031362: anchored to external side of plasma membrane cellular_component
GO:0031362: anchored to external side of plasma membrane cellular_component
GO:0031362: anchored to external side of plasma membrane cellular_component
GO:0033222: xylose binding molecular_function
GO:0033222: xylose binding molecular_function
GO:0033222: xylose binding molecular_function
GO:0055052: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing cellular_component
GO:0055052: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing cellular_component
GO:0055052: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing cellular_component
AuthorHaft DH
Entry DateJul 27 2005 4:57PM
Last ModifiedFeb 14 2011 3:27PM
CommentMembers of this family are periplasmic (when in Gram-negative bacteria) binding proteins for D-xylose import by a high-affinity ATP-binding cassette (ABC) transporter.
ReferencesRN [1] RM 9657999 RT The D-xylose-binding protein, XylF, from Thermoanaerobacter ethanolicus 39E: cloning, molecular analysis, and expression of the structural gene. RA Erbeznik M, Strobel HJ, Dawson KA, Jones CR. RL J Bacteriol. 1998 Jul;180(14):3570-7.
Genome PropertyGenProp0459: D-xylose utilization (conversion to D-xylulose-5-phosphate) (HMM)
GenProp0459: D-xylose utilization (conversion to D-xylulose-5-phosphate) (HMM)
GenProp0459: D-xylose utilization (conversion to D-xylulose-5-phosphate) (HMM)