HMM Summary Page: TIGR02637

AccessionTIGR02637
NameRhaS
Functionrhamnose ABC transporter, rhamnose-binding protein
Gene SymbolrhaS
Trusted Cutoff342.25
Domain Trusted Cutoff342.25
Noise Cutoff279.70
Domain Noise Cutoff279.70
Isology Typeequivalog
HMM Length302
Gene Ontology TermGO:0015762: rhamnose transport biological_process
GO:0015762: rhamnose transport biological_process
GO:0015762: rhamnose transport biological_process
GO:0030288: outer membrane-bounded periplasmic space cellular_component
GO:0030288: outer membrane-bounded periplasmic space cellular_component
GO:0030288: outer membrane-bounded periplasmic space cellular_component
GO:0031362: anchored to external side of plasma membrane cellular_component
GO:0031362: anchored to external side of plasma membrane cellular_component
GO:0031362: anchored to external side of plasma membrane cellular_component
GO:0033296: rhamnose binding molecular_function
GO:0033296: rhamnose binding molecular_function
GO:0033296: rhamnose binding molecular_function
GO:0033297: rhamnose-transporting ATPase activity molecular_function
GO:0033297: rhamnose-transporting ATPase activity molecular_function
GO:0033297: rhamnose-transporting ATPase activity molecular_function
GO:0055052: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing cellular_component
GO:0055052: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing cellular_component
GO:0055052: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing cellular_component
AuthorSelengut J
Entry DateJul 28 2005 4:24PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis sugar-binding component of ABC transporter complexes is found in rhamnose catabolism operon contexts. Mutation of this gene in Rhizobium leguminosarum [1] abolishes rhamnose transport and prevents growth on rhamnose as a carbon source.
ReferencesRN [1] RM PMID: 15576793 RT A genetic locus necessary for rhamnose uptake and catabolism in Rhizobium leguminosarum bv. trifolii. RA Richardson JS, Hynes MF, Oresnik IJ. RL J Bacteriol. 2004 Dec;186(24):8433-42.
Genome PropertyGenProp0457: rhamnose catabolism (HMM)
GenProp0457: rhamnose catabolism (HMM)
GenProp0457: rhamnose catabolism (HMM)