Accession | TIGR02711 |
Name | symport_actP |
Function | cation/acetate symporter ActP |
Gene Symbol | actP |
Trusted Cutoff | 1099.25 |
Domain Trusted Cutoff | 1099.25 |
Noise Cutoff | 893.30 |
Domain Noise Cutoff | 893.30 |
Isology Type | equivalog |
HMM Length | 549 |
Mainrole Category | Transport and binding proteins |
Subrole Category | Carbohydrates, organic alcohols, and acids |
Gene Ontology Term | GO:0005887: integral to plasma membrane cellular_component |
| GO:0006814: sodium ion transport biological_process |
| GO:0015370: solute:sodium symporter activity molecular_function |
| GO:0031402: sodium ion binding molecular_function |
Author | Haft DH |
Entry Date | Nov 30 2005 1:29PM |
Last Modified | Feb 14 2011 3:27PM |
Comment | Members of this family belong to the Sodium:solute symporter family. Both members of this family and other close homologs tend to be encoded next to a member of Pfam family PF04341, a set of uncharacterized membrane proteins. The characterized member from E. coli is encoded near and cotranscribed with the acetyl coenzyme A synthetase (acs) gene. Proximity to an acs gene was used as one criterion for determining the trusted cutoff for this model. Closely related proteins may differ in function and are excluded by the high cutoffs of this model; members of the family of phenylacetic acid transporter PhaJ can score as high as 1011 bits. |
References | DR PFAM; PF00474; SSF; Sodium:solute symporter family
RN [1]
RM 14563880
RT The gene yjcG, cotranscribed with the gene acs, encodes an acetate permease in Escherichia coli.
RA Gimenez R, Nunez MF, Badia J, Aguilar J, Baldoma L.
RL J Bacteriol. 2003 Nov;185(21):6448-55.
DR HAMAP; MF_01426; 29 of 30 |