HMM Summary Page: TIGR02742

AccessionTIGR02742
NameTrbC_Ftype
Functiontype-F conjugative transfer system pilin assembly protein TrbC
Gene SymboltrbC
Trusted Cutoff66.45
Domain Trusted Cutoff66.45
Noise Cutoff39.45
Domain Noise Cutoff39.45
Isology Typeequivalog
HMM Length130
AuthorSelengut J
Entry DateDec 18 2005 11:12AM
Last ModifiedFeb 14 2011 3:27PM
CommentThis protein is an essential component of the F-type conjugative pilus assembly system for the transfer of plasmid DNA [1,2]. The N-terminal portion of these proteins are heterogeneous and are not covered by this model.
ReferencesRN [1] RM PMID: 205063 RA Maneewannakul S, Maneewannakul K, Ippen-Ihler K. RT Characterization of trbC, a new F plasmid tra operon gene that is essential to conjugative transfer. RL J Bacteriol. 1991 Jun;173(12):3872-8. RN [2] RM PMID: 16138100 RA Frost LS, Leplae R, Summers AO, Toussaint A. RT Mobile genetic elements: the agents of open source evolution. RL Nat Rev Microbiol. 2005 Sep;3(9):722-32.
Genome PropertyGenProp0484: F-type conjugation system (type IV secretion) specific components (HMM)
GenProp0484: F-type conjugation system (type IV secretion) specific components (HMM)
GenProp0484: F-type conjugation system (type IV secretion) specific components (HMM)