HMM Summary Page: TIGR02746

AccessionTIGR02746
NameTraC-F-type
Functiontype-IV secretion system protein TraC
Gene SymboltraC
Trusted Cutoff567.05
Domain Trusted Cutoff567.05
Noise Cutoff286.55
Domain Noise Cutoff286.55
Isology Typeequivalog
HMM Length800
AuthorSelengut J
Entry DateDec 19 2005 2:19PM
Last ModifiedFeb 14 2011 3:27PM
CommentThe protein family described here is common among the F, P and I-like type IV secretion systems. Gene symbols include TraC (F-type), TrbE/VirB4 (P-type) and TraU (I-type). The protein conyains the Walker A and B motifs and so is a putative nucleotide triphosphatase.
ReferencesRN [1] RM PMID: 12855161 RA Lawley TD, Klimke WA, Gubbins MJ, Frost LS. RT F factor conjugation is a true type IV secretion system. RL FEMS Microbiol Lett. 2003 Jul 15;224(1):1-15. RN [2] RM PMID: 12855161 RA Lawley TD, Klimke WA, Gubbins MJ, Frost LS. RT F factor conjugation is a true type IV secretion system. RL FEMS Microbiol Lett. 2003 Jul 15;224(1):1-15. RN [3] RM PMID: 16138100 RA Frost LS, Leplae R, Summers AO, Toussaint A. RT Mobile genetic elements: the agents of open source evolution. RL Nat Rev Microbiol. 2005 Sep;3(9):722-32.
Genome PropertyGenProp0485: F and P-type conjugation systems (type IV secretion), common components (HMM)
GenProp0485: F and P-type conjugation systems (type IV secretion), common components (HMM)
GenProp0485: F and P-type conjugation systems (type IV secretion), common components (HMM)