HMM Summary Page: TIGR03020
| Accession | TIGR03020 |
| Name | EpsA |
| Function | transcriptional regulator EpsA |
| Gene Symbol | epsA |
| Trusted Cutoff | 223.30 |
| Domain Trusted Cutoff | 223.30 |
| Noise Cutoff | 122.90 |
| Domain Noise Cutoff | 122.90 |
| Isology Type | equivalog |
| HMM Length | 247 |
| Author | Selengut J |
| Entry Date | Jul 26 2006 10:58AM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | Proteins in this family include a C-terminal LuxR transcriptional regulator domain (PF00196). These proteins are positioned proximal to either EpsH-containing exopolysaccharide biosynthesis operons of the Methylobacillus type [1], or the associated PEP-CTERM-containing genes [2]. |
| References | RN [1] RM 12624205 RA Yoshida T, Ayabe Y, Yasunaga M, Usami Y, Habe H, Nojiri H, Omori T RT Genes involved in the synthesis of the exopolysaccharide methanolan by the obligate methylotroph Methylobacillus sp strain 12S. RL Microbiology. 2003 Feb;149(Pt 2):431-44. RN [2] RA Haft DH, Paulsen IT, Ward N, Selengut JD RT Exopolysaccharide-associated protein sorting in environmental organisms by the PEP-CTERM/EpsH system: application of a novel phylogenetic profiling heuristic. RL BMC Biol., in press, 2006 |
| Genome Property | GenProp0655: exopolysaccharide biosynthesis, exosortase B-associated (HMM) |