| Accession | TIGR03063 |
| Name | srtB_target |
| Function | sortase B cell surface sorting signal |
| Trusted Cutoff | 18.15 |
| Domain Trusted Cutoff | 18.15 |
| Noise Cutoff | 17.60 |
| Domain Noise Cutoff | 17.60 |
| Isology Type | domain |
| HMM Length | 29 |
| Author | Haft DH |
| Entry Date | Sep 6 2006 11:12AM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | Two different classes of sorting signal, both analogous to the sortase A signal LPXTG, may be recognized by the sortase SrtB. These are given as NXZTN and NPKXZ. Proteins sorted by this class of sortase are less common than the sortase A and LPXTG system. This model describes a number of cell surface protein C-terminal regions from Gram-positive bacteria that appear to be sortase B (SrtB) sorting signals. |
| References | RN [1]
RM PMID: 16247833
RT Identification of substrates of the Listeria monocytogenes sortases A and B by a non-gel proteomic analysis.
RA Pucciarelli MG, Calvo E, Sabet C, Bierne H, Cossart P, Garcia-del Portillo F
RL Proteomics. 2005 Dec;5(18):4808-17. |
| Genome Property | GenProp0664: protein sorting system, sortase type, SrtB class (HMM) |
