HMM Summary Page: TIGR03174

AccessionTIGR03174
Namecas_Csc3
FunctionCRISPR type I-D/CYANO-associated protein Csc3/Cas10d
Gene Symbolcsc3
Trusted Cutoff60.00
Domain Trusted Cutoff40.00
Noise Cutoff25.00
Domain Noise Cutoff25.00
Isology Typeequivalog
HMM Length946
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryOther
Gene Ontology TermGO:0003674: molecular_function molecular_function
GO:0003674: molecular_function molecular_function
GO:0003674: molecular_function molecular_function
AuthorHaft DH
Entry DateNov 29 2006 9:32AM
Last ModifiedFeb 14 2011 3:27PM
CommentCRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family is a CRISPR-associated (Cas) family strictly associated with the Cyano subtype of CRISPR/Cas locus, found in several species of Cyanobacteria and several archaeal species. This family is designated Csc3 for CRISPR/Cas Subtype Cyano protein 3, as it is often the third gene upstream of the core cas genes, cas3-cas4-cas1-cas2.
Genome PropertyGenProp0685: CRISPR system, I-D/Cyano subtype (HMM)
GenProp0685: CRISPR system, I-D/Cyano subtype (HMM)
GenProp0685: CRISPR system, I-D/Cyano subtype (HMM)