| Accession | TIGR03236 |
| Name | dnd_assoc_1 |
| Function | DNA phosphorothioation-dependent restriction protein DptG |
| Gene Symbol | dptG |
| Trusted Cutoff | 20.00 |
| Domain Trusted Cutoff | 20.00 |
| Noise Cutoff | 10.00 |
| Domain Noise Cutoff | 10.00 |
| Isology Type | equivalog |
| HMM Length | 363 |
| Mainrole Category | Unknown function |
| Subrole Category | General |
| Author | Haft DH |
| Entry Date | Jan 4 2007 11:12AM |
| Last Modified | Feb 10 2012 11:45AM |
| Comment | A DNA sulfur modification (phosphorothioation) system, dnd (degradation during electrophoresis), is sparsely and sporadically distributed among the bacteria. This protein is one member of a three-gene restriction enzyme cassette that depends on DNA phosphorothioation. |
| References | RN [1]
RM PMID:20627870
RT A novel host-specific restriction system associated with DNA backbone S-modification in Salmonella.
RA Xu T, Yao F, Zhou X, Deng Z, You D
RL Nucleic Acids Res. 2010 Nov 1;38(20):7133-41.
RN [2]
RM PMID:22070167
RT ProPhylo: partial phylogenetic profiling to guide protein family construction and assignment of biological process.
RA Basu MK, Selengut JD, Haft DH
RL BMC Bioinformatics. 2011 Nov 9;12:434. |
| Genome Property | GenProp0701: DNA sulfur modification system dnd (HMM) |
