HMM Summary Page: TIGR03280

AccessionTIGR03280
Namemethan_mark_11
Functionmethanogenesis imperfect marker protein 11
Trusted Cutoff255.80
Domain Trusted Cutoff255.80
Noise Cutoff127.60
Domain Noise Cutoff127.60
Isology Typehypoth_equivalog
HMM Length292
AuthorHaft DH
Entry DateJan 19 2007 4:11PM
Last ModifiedMay 11 2011 6:47PM
CommentThe first twenty-nine completed genomes with a member of this protein family include twenty-eight archaeal methanogens and one other related archaeon, Ferroglobus placidus DSM 10642. The exact function is unknown, but the protein likely belongs to a system usually tightly linked to methanogenesis.
Genome PropertyGenProp0722: methanogenesis marker set (HMM)
GenProp0722: methanogenesis marker set (HMM)
GenProp0722: methanogenesis marker set (HMM)
GenProp0722: methanogenesis marker set (HMM)
GenProp0722: methanogenesis marker set (HMM)
GenProp0722: methanogenesis marker set (HMM)