HMM Summary Page: TIGR03339

AccessionTIGR03339
Namephn_lysR
Functionaminoethylphosphonate catabolism associated LysR family transcriptional regulator
Trusted Cutoff341.10
Domain Trusted Cutoff341.10
Noise Cutoff238.95
Domain Noise Cutoff238.95
Isology Typesubfamily
HMM Length279
AuthorSelengut J
Entry DateMar 9 2007 9:16AM
Last ModifiedFeb 14 2011 3:27PM
CommentThis group of sequences represents a number of related clades with numerous examples of members adjacent to operons for the degradation of 2-aminoethylphosphonate (AEP) in Pseudomonas, Ralstonia, Bordetella and Burkholderia species. These are transcriptional regulators of the LysR family which contain a helix-turn-helix (HTH) domain (PF00126) and a periplasmic substrate-binding protein-like domain (PF03466).
Genome PropertyGenProp0720: 2-aminoethylphosphonate utilization (HMM)
GenProp0720: 2-aminoethylphosphonate utilization (HMM)
GenProp0720: 2-aminoethylphosphonate utilization (HMM)
GenProp0720: 2-aminoethylphosphonate utilization (HMM)
GenProp0720: 2-aminoethylphosphonate utilization (HMM)
GenProp0720: 2-aminoethylphosphonate utilization (HMM)