| Accession | TIGR03350 |
| Name | type_VI_ompA |
| Function | type VI secretion system peptidoglycan-associated domain |
| Trusted Cutoff | 139.80 |
| Domain Trusted Cutoff | 139.80 |
| Noise Cutoff | 133.80 |
| Domain Noise Cutoff | 133.80 |
| Isology Type | equivalog_domain |
| HMM Length | 137 |
| Mainrole Category | Protein fate |
| Subrole Category | Protein and peptide secretion and trafficking |
| Gene Ontology Term | GO:0003674: molecular_function molecular_function |
| | GO:0033103: protein secretion by the type VI secretion system biological_process |
| | GO:0033104: type VI protein secretion system complex cellular_component |
| Author | Haft DH |
| Entry Date | Mar 15 2007 10:44AM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | The flagellar motor protein MotB, the Gram-negative bacterial outer membrane protein OmpA (with an N-terminal outer membrane beta barrel domain) share a C-terminal peptidoglycan-associating homology region. This model describes a domain found fused to type VI secretion system homologs of the type IV system protein DotU (see model TIGR03349), with OmpA/MotB homology. |
| References | RN [1]
RM PMID: 16763151
RT A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus.
RA Mougous JD, Cuff ME, Raunser S, Shen A, Zhou M, Gifford CA, Goodman AL, Joachimiak G, Ordonez CL, Lory S, Walz T, Joachimiak A, Mekalanos JJ
RL Science. 2006 Jun 9;312(5779):1526-30. |
| Genome Property | GenProp0735: type VI secretion (HMM) |
