HMM Summary Page: TIGR03352

AccessionTIGR03352
NameVI_chp_3
Functiontype VI secretion lipoprotein, VC_A0113 family
Trusted Cutoff31.60
Domain Trusted Cutoff31.60
Noise Cutoff26.40
Domain Noise Cutoff26.40
Isology Typehypoth_equivalog
HMM Length147
Mainrole CategoryProtein fate
Subrole CategoryProtein and peptide secretion and trafficking
Gene Ontology TermGO:0003674: molecular_function molecular_function
GO:0003674: molecular_function molecular_function
GO:0003674: molecular_function molecular_function
GO:0033103: protein secretion by the type VI secretion system biological_process
GO:0033103: protein secretion by the type VI secretion system biological_process
GO:0033103: protein secretion by the type VI secretion system biological_process
AuthorHaft DH
Entry DateMar 15 2007 2:30PM
Last ModifiedFeb 14 2011 3:27PM
CommentWork by Mougous, et al. (2006), describes IAHP-related loci as a type VI secretion system (PMID:16763151). This protein family is associated with type VI secretion loci, although not treated explicitly by Mougous, et al.
ReferencesRN [1] RM PMID: 16763151 RT A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus. RA Mougous JD, Cuff ME, Raunser S, Shen A, Zhou M, Gifford CA, Goodman AL, Joachimiak G, Ordonez CL, Lory S, Walz T, Joachimiak A, Mekalanos JJ RL Science. 2006 Jun 9;312(5779):1526-30.
Genome PropertyGenProp0735: type VI secretion (HMM)
GenProp0735: type VI secretion (HMM)
GenProp0735: type VI secretion (HMM)
GenProp0735: type VI secretion (HMM)
GenProp0735: type VI secretion (HMM)
GenProp0735: type VI secretion (HMM)
GenProp0735: type VI secretion (HMM)
GenProp0735: type VI secretion (HMM)
GenProp0735: type VI secretion (HMM)