HMM Summary Page: TIGR03353

AccessionTIGR03353
NameVI_chp_4
Functiontype VI secretion protein, VC_A0114 family
Trusted Cutoff211.60
Domain Trusted Cutoff211.60
Noise Cutoff139.20
Domain Noise Cutoff139.20
Isology Typehypoth_equivalog
HMM Length442
Mainrole CategoryProtein fate
Subrole CategoryProtein and peptide secretion and trafficking
Gene Ontology TermGO:0003674: molecular_function molecular_function
GO:0033103: protein secretion by the type VI secretion system biological_process
AuthorHaft DH
Entry DateMar 15 2007 2:53PM
Last ModifiedFeb 14 2011 3:27PM
CommentWork by Mougous, et al. (2006), describes IAHP-related loci as a type VI secretion system (PMID:16763151). This protein family is associated with type VI secretion loci, although not treated explicitly by Mougous, et al.
ReferencesRN [1] RM PMID: 16763151 RT A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus. RA Mougous JD, Cuff ME, Raunser S, Shen A, Zhou M, Gifford CA, Goodman AL, Joachimiak G, Ordonez CL, Lory S, Walz T, Joachimiak A, Mekalanos JJ RL Science. 2006 Jun 9;312(5779):1526-30.
Genome PropertyGenProp0735: type VI secretion (HMM)