HMM Summary Page: TIGR03354

AccessionTIGR03354
NameVI_FHA
Functiontype VI secretion system FHA domain protein
Trusted Cutoff120.25
Domain Trusted Cutoff120.25
Noise Cutoff92.95
Domain Noise Cutoff92.95
Isology Typehypoth_equivalog
HMM Length420
Mainrole CategoryProtein fate
Subrole CategoryProtein and peptide secretion and trafficking
Gene Ontology TermGO:0003674: molecular_function molecular_function
GO:0003674: molecular_function molecular_function
GO:0003674: molecular_function molecular_function
GO:0033103: protein secretion by the type VI secretion system biological_process
GO:0033103: protein secretion by the type VI secretion system biological_process
GO:0033103: protein secretion by the type VI secretion system biological_process
AuthorHaft DH
Entry DateMar 15 2007 3:02PM
Last ModifiedFeb 14 2011 3:27PM
CommentMembers of this protein family are FHA (forkhead-associated) domain-containing proteins that are part of type VI secretion loci in a considerable number of bacteria, most of which are known pathogens. Species include Pseudomonas aeruginosa PAO1, Aeromonas hydrophila, Yersinia pestis, Burkholderia mallei, etc.
ReferencesDR PFAM; PF00498; FHA domain RN [1] RM PMID: 16763151 RT A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus. RA Mougous JD, Cuff ME, Raunser S, Shen A, Zhou M, Gifford CA, Goodman AL, Joachimiak G, Ordonez CL, Lory S, Walz T, Joachimiak A, Mekalanos JJ RL Science. 2006 Jun 9;312(5779):1526-30.
Genome PropertyGenProp0735: type VI secretion (HMM)
GenProp0735: type VI secretion (HMM)
GenProp0735: type VI secretion (HMM)