HMM Summary Page: TIGR03357
Accession | TIGR03357 |
Name | VI_zyme |
Function | type VI secretion system lysozyme-like protein |
Trusted Cutoff | 53.20 |
Domain Trusted Cutoff | 53.20 |
Noise Cutoff | 50.60 |
Domain Noise Cutoff | 50.60 |
Isology Type | hypoth_equivalog |
HMM Length | 133 |
Gene Ontology Term | GO:0003674: molecular_function molecular_function |
GO:0033103: protein secretion by the type VI secretion system biological_process | |
Author | Haft DH |
Entry Date | Mar 16 2007 11:25AM |
Last Modified | Dec 8 2011 12:26PM |
Comment | The description for PFAM family PF04965 cites acidic lysozyme activity for some phage-encoded members. This family represents a different subgroup of the proteins from PF04965, where all members are associated with bacterial type VI secretion system genomic contexts. |
References | DR PFAM; PF04965; GPW / gp25 family RN [1] RM PMID: 16763151 RT A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus. RA Mougous JD, Cuff ME, Raunser S, Shen A, Zhou M, Gifford CA, Goodman AL, Joachimiak G, Ordonez CL, Lory S, Walz T, Joachimiak A, Mekalanos JJ RL Science. 2006 Jun 9;312(5779):1526-30. |
Genome Property | GenProp0735: type VI secretion (HMM) |