HMM Summary Page: TIGR03358

AccessionTIGR03358
NameVI_chp_5
Functiontype VI secretion protein, VC_A0107 family
Trusted Cutoff97.25
Domain Trusted Cutoff97.25
Noise Cutoff35.50
Domain Noise Cutoff35.50
Isology Typehypoth_equivalog
HMM Length160
Mainrole CategoryProtein fate
Subrole CategoryProtein and peptide secretion and trafficking
Gene Ontology TermGO:0003674: molecular_function molecular_function
GO:0003674: molecular_function molecular_function
GO:0003674: molecular_function molecular_function
GO:0033103: protein secretion by the type VI secretion system biological_process
GO:0033103: protein secretion by the type VI secretion system biological_process
GO:0033103: protein secretion by the type VI secretion system biological_process
AuthorHaft DH
Entry DateMar 16 2007 12:19PM
Last ModifiedFeb 14 2011 3:27PM
CommentWork by Mougous, et al. (2006), describes IAHP-related loci as a type VI secretion system (PMID:16763151). This protein family is associated with type VI secretion loci, although not treated explicitly by Mougous, et al.
ReferencesDR PF05591; DUF770 RN [1] RM PMID: 16763151 RT A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus. RA Mougous JD, Cuff ME, Raunser S, Shen A, Zhou M, Gifford CA, Goodman AL, Joachimiak G, Ordonez CL, Lory S, Walz T, Joachimiak A, Mekalanos JJ RL Science. 2006 Jun 9;312(5779):1526-30.
Genome PropertyGenProp0735: type VI secretion (HMM)
GenProp0735: type VI secretion (HMM)
GenProp0735: type VI secretion (HMM)