HMM Summary Page: TIGR03517

AccessionTIGR03517
NameGldM_gliding
Functiongliding motility-associated protein GldM
Gene SymbolgldM
Trusted Cutoff269.35
Domain Trusted Cutoff269.35
Noise Cutoff97.30
Domain Noise Cutoff97.30
Isology Typesubfamily
HMM Length524
AuthorHaft DH
Entry DateDec 14 2007 3:49PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis protein family, GldM, is named for the member from Flavobacterium johnsoniae, which is required for a type of rapid gliding motility found in certain members of the Bacteriodetes. However, members are found also in several members of the Bacteriodetes that appear not to be motile. The best conserved region, toward the N-terminus, is centered on a highly hydrobobic probable transmembrane helix. Two paralogs are found in Cytophaga hutchinsonii.
ReferencesRN [1] RM PMID:16199564 RT Flavobacterium johnsoniae gliding motility genes identified by mariner mutagenesis. RA Braun TF, Khubbar MK, Saffarini DA, McBride MJ RL J Bacteriol. 2005 Oct;187(20):6943-52.
Genome PropertyGenProp0781: gliding motility, Bacteroidetes type (HMM)
GenProp0781: gliding motility, Bacteroidetes type (HMM)
GenProp0781: gliding motility, Bacteroidetes type (HMM)