HMM Summary Page: TIGR03538

Functionsuccinyldiaminopimelate transaminase
Gene SymboldapC
Trusted Cutoff474.60
Domain Trusted Cutoff474.60
Noise Cutoff424.35
Domain Noise Cutoff424.35
Isology Typeequivalog
EC Number2.6.1.17
HMM Length395
Gene Ontology TermGO:0009016: succinyldiaminopimelate transaminase activity molecular_function
GO:0019877: diaminopimelate biosynthetic process biological_process
AuthorSelengut J
Entry DateJan 31 2008 1:44PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis [1]. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
ReferencesRN [1] RM PMID:10850974 RT Characterization of a bordetella pertussis diaminopimelate (DAP) biosynthesis locus identifies dapC, a novel gene coding for an N-succinyl-L,L-DAP aminotransferase. RA Fuchs TM, Schneider B, Krumbach K, Eggeling L, Gross R RL J Bacteriol. 2000 Jul;182(13):3626-31.
Genome PropertyGenProp0786: lysine biosynthesis via diaminopimelate (DAP), succinylated branch (HMM)