HMM Summary Page: TIGR03617

AccessionTIGR03617
NameF420_MSMEG_2256
Functionprobable F420-dependent oxidoreductase, MSMEG_2256 family
Trusted Cutoff278.15
Domain Trusted Cutoff278.15
Noise Cutoff177.10
Domain Noise Cutoff177.10
Isology Typesubfamily
EC Number1.-.-.-
HMM Length318
Mainrole CategoryUnknown function
Subrole CategoryEnzymes of unknown specificity
Gene Ontology TermGO:0008150: biological_process biological_process
GO:0008150: biological_process biological_process
GO:0008150: biological_process biological_process
GO:0016491: oxidoreductase activity molecular_function
GO:0016491: oxidoreductase activity molecular_function
GO:0016491: oxidoreductase activity molecular_function
AuthorHaft DH
Entry DateJun 9 2008 5:24PM
Last ModifiedFeb 14 2011 3:27PM
CommentCoenzyme F420 has a limited phylogenetic distribution, including methanogenic archaea, Mycobacterium tuberculosis and related species, Colwellia psychrerythraea 34H, Rhodopseudomonas palustris HaA2, and others. Partial phylogenetic profiling identifies protein subfamilies, within the larger family called luciferase-like monooxygenanases (PF00296), that appear only in F420-positive genomes and are likely to be F420-dependent. This model describes one such subfamily, exemplified by MSMEG_2256 from Mycobacterium smegmatis.
ReferencesRN [1] RM PMID:20675471 RT Unexpected abundance of coenzyme F(420)-dependent enzymes in Mycobacterium tuberculosis and other actinobacteria. RA Selengut JD, Haft DH RL J Bacteriol. 2010 Nov;192(21):5788-98.
Genome PropertyGenProp0002: coenzyme F420 utilization (HMM)
GenProp0002: coenzyme F420 utilization (HMM)
GenProp0002: coenzyme F420 utilization (HMM)