HMM Summary Page: TIGR03647

AccessionTIGR03647
NameNa_symport_sm
Functionputative solute:sodium symporter small subunit
Trusted Cutoff26.05
Domain Trusted Cutoff26.05
Noise Cutoff19.45
Domain Noise Cutoff19.45
Isology Typesubfamily_domain
HMM Length77
Mainrole CategoryTransport and binding proteins
Subrole CategoryUnknown substrate
AuthorHaft DH
Entry DateJul 15 2008 10:34AM
Last ModifiedFeb 14 2011 3:27PM
CommentMembers of this family are highly hydrophobic bacterial proteins of about 90 amino acids in length. Members usually are found immediately upstream (sometimes fused to) a member of the solute:sodium symporter family, and therefore are a putative sodium:solute symporter small subunit. Members tend to be found in aquatic species, especially those from marine or other high salt environments.
Genome PropertyGenProp0821: putative Na:solute symporter two-gene cassette (HMM)
GenProp0821: putative Na:solute symporter two-gene cassette (HMM)
GenProp0821: putative Na:solute symporter two-gene cassette (HMM)
GenProp0821: putative Na:solute symporter two-gene cassette (HMM)
GenProp0821: putative Na:solute symporter two-gene cassette (HMM)
GenProp0821: putative Na:solute symporter two-gene cassette (HMM)