HMM Summary Page: TIGR03653

AccessionTIGR03653
NameuL6_arch
Functionribosomal protein uL6
Gene Symbolrpl6p
Trusted Cutoff185.40
Domain Trusted Cutoff185.40
Noise Cutoff183.35
Domain Noise Cutoff183.35
Isology Typeequivalog
HMM Length170
Mainrole CategoryProtein synthesis
Subrole CategoryRibosomal proteins: synthesis and modification
Gene Ontology TermGO:0003735: structural constituent of ribosome molecular_function
GO:0003735: structural constituent of ribosome molecular_function
GO:0003735: structural constituent of ribosome molecular_function
GO:0006412: translation biological_process
GO:0006412: translation biological_process
GO:0006412: translation biological_process
GO:0019843: rRNA binding molecular_function
GO:0019843: rRNA binding molecular_function
GO:0019843: rRNA binding molecular_function
GO:0022625: cytosolic large ribosomal subunit cellular_component
GO:0022625: cytosolic large ribosomal subunit cellular_component
GO:0022625: cytosolic large ribosomal subunit cellular_component
AuthorHaft DH
Entry DateSep 2 2008 11:55AM
Last ModifiedSep 4 2014 12:52PM
CommentMembers of this protein family are the archaeal form ofribosomal protein uL6 (previously L9 in yeast and human). The top-scoring proteins not selected by this model are eukaryotic cytosolic uL6. Bacterial ribosomal protein L6 scores lower and is described by a distinct model.
Genome PropertyGenProp0831: archaeal core gene set, exactly 1 per genome (HMM)
GenProp0831: archaeal core gene set, exactly 1 per genome (HMM)
GenProp0815: archaeal-only core gene set (HMM)
GenProp0815: archaeal-only core gene set (HMM)
GenProp0831: archaeal core gene set, exactly 1 per genome (HMM)
GenProp0831: archaeal core gene set, exactly 1 per genome (HMM)
GenProp0815: archaeal-only core gene set (HMM)
GenProp0815: archaeal-only core gene set (HMM)
GenProp0831: archaeal core gene set, exactly 1 per genome (HMM)
GenProp0831: archaeal core gene set, exactly 1 per genome (HMM)
GenProp0815: archaeal-only core gene set (HMM)
GenProp0815: archaeal-only core gene set (HMM)