HMM Summary Page: TIGR03665

FunctionarCOG04150 universal archaeal KH domain protein
Trusted Cutoff114.20
Domain Trusted Cutoff114.20
Noise Cutoff98.80
Domain Noise Cutoff98.80
Isology Typeequivalog
HMM Length173
AuthorSelengut J
Entry DateOct 3 2008 2:26PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis family of proteins is universal among the 41 archaeal genomes analyzed in [1] and is not observed outside of the archaea. The proteins contain a single KH domain (PF00013) which is likely to confer the ability to bind RNA.
ReferencesRN [1] RM PMID:18042280 RT Clusters of orthologous genes for 41 archaeal genomes and implications for evolutionary genomics of archaea. RA Makarova KS, Sorokin AV, Novichkov PS, Wolf YI, Koonin EV RL Biol Direct. 2007 Nov 27;2:33. DR URL:
Genome PropertyGenProp0815: archaeal-only core gene set (HMM)
GenProp0831: archaeal core gene set, exactly 1 per genome (HMM)