HMM Summary Page: TIGR03741

AccessionTIGR03741
NamePRTRC_E
FunctionPRTRC system protein E
Trusted Cutoff37.95
Domain Trusted Cutoff37.95
Noise Cutoff28.70
Domain Noise Cutoff28.70
Isology Typesubfamily_domain
HMM Length106
AuthorHaft DH
Entry DateMay 11 2009 9:45AM
Last ModifiedFeb 14 2011 3:27PM
CommentA novel genetic system characterized by six or seven major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family averages about 150 amino acids in length, but the last third contains low-complexity sequence that complicates sequence comparisons. This model does not include the low-complexity region.
Genome PropertyGenProp0854: ParB-rel/ThiF-rel cassette PRTRC (HMM)
GenProp0854: ParB-rel/ThiF-rel cassette PRTRC (HMM)
GenProp0854: ParB-rel/ThiF-rel cassette PRTRC (HMM)