HMM Summary Page: TIGR03745

AccessionTIGR03745
Nameconj_TIGR03745
Functionintegrating conjugative element membrane protein, PFL_4702 family
Trusted Cutoff52.50
Domain Trusted Cutoff52.50
Noise Cutoff41.50
Domain Noise Cutoff41.50
Isology Typehypoth_equivalog
HMM Length105
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryPlasmid functions
Gene Ontology TermGO:0003674: molecular_function molecular_function
GO:0003674: molecular_function molecular_function
GO:0003674: molecular_function molecular_function
GO:0005886: plasma membrane cellular_component
GO:0005886: plasma membrane cellular_component
GO:0005886: plasma membrane cellular_component
GO:0008150: biological_process biological_process
GO:0008150: biological_process biological_process
GO:0008150: biological_process biological_process
AuthorHaft DH
Entry DateMay 19 2009 8:57AM
Last ModifiedFeb 14 2011 3:27PM
CommentMembers of this protein family are found occasionally on plasmids such as the Pseudomonas putida TOL plasmid pWWO_p085. Usually, however, they are found on the bacterial main chromosome in a region flanked by markers of conjugative transfer and/or transposition.
Genome PropertyGenProp0855: integrating conjugative element, PFGI-1 class (HMM)
GenProp0855: integrating conjugative element, PFGI-1 class (HMM)
GenProp0855: integrating conjugative element, PFGI-1 class (HMM)