HMM Summary Page: TIGR03760

Functionintegrating conjugative element relaxase, PFGI-1 class
Gene SymboltraI
Trusted Cutoff161.40
Domain Trusted Cutoff161.40
Noise Cutoff144.10
Domain Noise Cutoff144.10
Isology Typeequivalog_domain
HMM Length218
AuthorHaft DH
Entry DateMay 25 2009 10:24PM
Last ModifiedFeb 14 2011 3:27PM
CommentMembers of this protein family are the TraI putative relaxases required for transfer by a subclass of integrating conjugative elements (ICE) as found in Pseudomonas fluorescens Pf-5, and understood from study of two related ICE, SXT and R391. This model represents the N-terminal domain. Note that no homology is detected to the similarly named TraI relaxase of the F plasmid.
Genome PropertyGenProp0855: integrating conjugative element, PFGI-1 class (HMM)