HMM Summary Page: TIGR03770

Functionanchored repeat-type ABC transporter, permease subunit
Trusted Cutoff296.80
Domain Trusted Cutoff296.80
Noise Cutoff296.65
Domain Noise Cutoff296.65
Isology Typeequivalog
HMM Length270
Mainrole CategoryTransport and binding proteins
Subrole CategoryUnknown substrate
AuthorHaft DH
Entry DateJun 15 2009 9:10AM
Last ModifiedFeb 14 2011 3:27PM
CommentThis protein family is the permease subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in the adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous permease subunits outside the scope of this family include manganese transporter MntB in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Genome PropertyGenProp0857: anchored repeat-class ABC transporter, P. acnes type (HMM)