HMM Summary Page: TIGR03776

Functionrickettsial palindromic element RPE5 domain
Trusted Cutoff29.45
Domain Trusted Cutoff29.45
Noise Cutoff28.30
Domain Noise Cutoff28.30
Isology Typedomain
HMM Length43
AuthorHaft DH
Entry DateJun 16 2009 2:51PM
Last ModifiedMar 2 2011 2:55PM
CommentThis HMM describes protein translations of a family, RPE5, of Rickettsia palindromic elements (RPE). The elements spread within a genome as selfish genetic elements, inserting into genes additional coding region that does not disrupt the reading frame. This model finds RPE-encoded regions in several Rickettsial species and, so far, no where else.
Genome PropertyGenProp0476: protein-coding palindromic elements (HMM)